Papers
Below you can find a list of published papers from the BioSimGrid project. Some of the links will take you away from the BioSimGrid website on to the site of the publisher of the journal.
2006
- Stuart E. Murdock, Kaihsu Tai, Muan Hong Ng, Steven Johnston, Bing Wu, Hans Fangohr, Charles A. Laughton, Jonathan W. Essex, Mark S. P. Sansom (2006) Quality assurance for biomolecular simulations. J. Chem. Theory Comput. 10.1021/ct6001708
- Kaihsu Tai, Marc Baaden, Stuart Murdock, Bing Wu, Muan Hong Ng, Steven Johnston, Richard Boardman, Hans Fangohr, Katherine Cox, Jonathan W. Essex, Mark S. P. Sansom (2006) Three hydrolases and a transferase: comparative analysis of active-site dynamics via the BioSimGrid database. J. Mol. Graph. Model. 10.1016/j.jmgm.2006.08.010
- Muan Hong Ng, Steven Johnston, Bing Wu, Stuart E. Murdock, Kaihsu Tai, Hans Fangohr, Simon J. Cox, Jonathan W. Essex, Mark S. P. Sansom, Paul Jeffreys (2006) BioSimGrid: grid-enabled biomolecular simulation data storage and analysis. Future Gener. Comput. Syst. 22:657–664 DOI: 10.1016/j.future.2005.10.005 (self-archived e-print) .
2005
- Bing Wu, Kaihsu Tai, Muan Hong Ng, Steven Johnston, Stuart Murdock, Hans Fangohr, Mark S. P. Sansom, Jonathan Essex, Paul Jeffreys, Simon Cox (2005) Towards a grid-enabled biomolecular simulation database. In Proceedings of UK e-Science All Hands Meeting 2005, pages 577–580. Simon J. Cox, David W. Walker, editors. Swindon: EPSRC. ISBN 1-904425-53-4
- Christopher J. Woods, Muan Hong Ng, Steven Johnston, Stuart E. Murdock, Bing Wu, Kaihsu Tai, Hans Fangohr, Paul Jeffreys, Simon Cox, Jeremy G. Frey, Mark S. P. Sansom, Jonathan W. Essex (2005) Grid computing and biomolecular simulation. Phil. Trans. Royal Soc. A 363:2017–2035 DOI: 10.1098/rsta.2005.1626 (self-archived e-print)
2004
- Kaihsu Tai, Stuart Murdock, Bing Wu, Muan Hong Ng, Steven Johnston, Hans Fangohr, Simon J. Cox, Paul Jeffreys, Jonathan W. Essex, Mark S. P. Sansom (2004) BioSimGrid: towards a worldwide repository for biomolecular simulations. Org. Biomol. Chem. 2:3219–3221 DOI: 10.1039/b411352g
- Muan Hong Ng, Steven Johnston, Stuart Murdock, Bing Wu, Kaihsu Tai, Hans Fangohr, Simon Cox, Jonathan W. Essex, Mark Sansom, Paul Jeffreys (2004) Efficient data storage and analysis for generic biomolecular simulation data. In Proceedings of UK e-Science All Hands Meeting 2004, pages 443–450. Simon J. Cox, editor. Swindon: EPSRC. ISBN 1-904425-21-6
- Bing Wu, Matthew Dovey, Kaihsu Tai, Muan Hong Ng,Stuart, Murdock, Hans Fangohr, Steven Johnston, Paul Jeffreys, Simon Cox, Jonathan W. Essex and Mark S.P. Sansom, Security and BioSimGrid: A Biomolecular Simulation Database, (PDF), Proceedings of Workshop on Grid Security Practice and Experience (UK e-Science Security Task Force) Oxford, 8-9 July 2004. Published as: University of York, Department of Computer Science Technical Report YCS-2004-380
- Bing Wu, Matthew Dovey, Muan Hong Ng, Kaihsu Tai, Stuart Murdock, Hans Fangohr, Steven Johnston, Paul Jeffreys, Simon Cox, Jonathan Essex and Mark S. P. Sansom, A Web / Grid Portal Implementation of BioSimGrid: A Biomolecular Simulation Database (abstract), J. Digit. Inf. Manag. 2(2):74-78, 2004. ISSN 0972 7272
- Bing Wu, Matthew Dovey, Muan Hong Ng, Kaihsu Tai, Stuart Murdock, Paul Jeffreys, Simon Cox, Jonathan Essex and Mark S.P. Sansom, A Web / Grid Portal Implementation of BioSimGrid: A Biomolecular Simulation Database (abstract), Proceedings ITCC 2004: International Conference on Information Technology: Coding and Computing, Volume 2, pages 50-54. Pradip K. Srimani et al., editors. Los Alamitos, California: IEEE Computer Society. ISBN 0-7695-2108-8
2003
- Bing Wu, Kaihsu Tai, Stuart Murdock, Muan Hong Ng, Steven Johnston, Hans Fangohr, Paul Jeffreys, Simon Cox, Jonathan Essex and Mark S.P. Sansom, BioSimGrid: A Distributed Database for Biomolecular Simulations (PDF, PS, Word), Simon J Cox (editor) Proceedings of UK e-Science All Hands Meeting 2003. Swindon: EPSRC. ISBN 1-904425-11-9
- Yalini Arinaminpathy, Oliver Beckstein, Philip C. Biggin, Peter J. Bond, Carmen Domene, Andrew Pang and Mark S.P. Sansom Large Scale Biomolecular Simulations: Current Status And Future Prospects - HPC paper (PDF, PS), Simon J Cox (editor) Proceedings of UK e-Science All Hands Meeting 2003. Swindon: EPSRC. ISBN 1-904425-11-9
Copyright © 2005, 2006 University of Southampton, University of Oxford
